1. Channels
  2. Na
  3. 217783-NaxSH0_ChannelML

Channel 217783-NaxSH0_ChannelML

General data

Metadata classes

  • Animal Model: mouse
  • Brain Area: olfactory bulb (OB)
  • Neuron Region: unspecified
  • Neuron Type: mitral cell
  • Subtype: not specified

Metadata generic

  • Authors: Gorin M, Tsitoura C, Kahan A, Watznauer K, Drose DR, Arts M, Mathar R, O'Connor S, Hanganu-Op
  • Comments: COMMENT ************************************************** File generated by: neuroConstruct v1.7.1 ************************************************** This file holds the implementation in NEURON of the Cell Mechanism: NaxSH0_ChannelML (Type: Channel mechanism, Model: ChannelML based process) with parameters: /channelml/@units = Physiological Units /channelml/notes = ChannelML file containing a single Channel description /channelml/channel_type/@name = NaxSH0_ChannelML /channelml/channel_type/@density = yes /channelml/channel_type/status/@value = stable /channelml/channel_type/status/comment = Agreement of generated NEURON and GENESIS to original NEURON mod. Compared voltage and n traces on single comp with current pulse /channelml/channel_type/status/contributor/name = Padraig Gleeson /channelml/channel_type/notes = Na Channel /channelml/channel_type/authorList/modelTranslator/name = Padraig Gleeson /channelml/channel_type/authorList/modelTranslator/institution = UCL /channelml/channel_type/authorList/modelTranslator/email = p.gleeson - at - ucl.ac.uk /channelml/channel_type/current_voltage_relation/@cond_law = ohmic /channelml/channel_type/current_voltage_relation/@ion = na /channelml/channel_type/current_voltage_relation/@default_gmax = 40 /channelml/channel_type/current_voltage_relation/@default_erev = 67 /channelml/channel_type/current_voltage_relation/@charge = 1 /channelml/channel_type/current_voltage_relation/q10_settings/@q10_factor = 2 /channelml/channel_type/current_voltage_relation/q10_settings/@experimental_temp = 24 /channelml/channel_type/current_voltage_relation/gate[1]/@name = m /channelml/channel_type/current_voltage_relation/gate[1]/@instances = 3 /channelml/channel_type/current_voltage_relation/gate[1]/closed_state/@id = m0 /channelml/channel_type/current_voltage_relation/gate[1]/open_state/@id = m /channelml/channel_type/current_voltage_relation/gate[1]/open_state/@fraction = 1 /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@name = alpha /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@from = m0 /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@to = m /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@expr_form = exp_linear /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@rate = 2.880000018 /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@scale = 7.2 /channelml/channel_type/current_voltage_relation/gate[1]/transition[1]/@midpoint = -30 /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@name = beta /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@from = m /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@to = m0 /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@expr_form = exp_linear /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@rate = 0.892800005 /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@scale = -7.2 /channelml/channel_type/current_voltage_relation/gate[1]/transition[2]/@midpoint = -30 /channelml/channel_type/current_voltage_relation/gate[1]/time_course/@name = tau /channelml/channel_type/current_voltage_relation/gate[1]/time_course/@from = m0 /channelml/channel_type/current_voltage_relation/gate[1]/time_course/@to = m /channelml/channel_type/current_voltage_relation/gate[1]/time_course/@expr_form = generic /channelml/channel_type/current_voltage_relation/gate[1]/time_course/@expr = 1/( (alpha + beta) * temp_adj_m ) < 0.02 ? (0.02 * temp_adj_m) : 1/(alpha + beta) /channelml/channel_type/current_voltage_relation/gate[2]/@name = h /channelml/channel_type/current_voltage_relation/gate[2]/@instances = 1 /channelml/channel_type/current_voltage_relation/gate[2]/closed_state/@id = h0 /channelml/channel_type/current_voltage_relation/gate[2]/open_state/@id = h /channelml/channel_type/current_voltage_relation/gate[2]/open_state/@fraction = 1 /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@name = alpha /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@from = h0 /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@to = h /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@expr_form = exp_linear /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@rate = 0.045 /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@scale = 1.5 /channelml/channel_type/current_voltage_relation/gate[2]/transition[1]/@midpoint = -45 /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@name = beta /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@from = h /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@to = h0 /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@expr_form = exp_linear /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@rate = 0.015 /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@scale = -1.5 /channelml/channel_type/current_voltage_relation/gate[2]/transition[2]/@midpoint = -45 /channelml/channel_type/current_voltage_relation/gate[2]/time_course/@name = tau /channelml/channel_type/current_voltage_relation/gate[2]/time_course/@from = h0 /channelml/channel_type/current_voltage_relation/gate[2]/time_course/@to = h /channelml/channel_type/current_voltage_relation/gate[2]/time_course/@expr_form = generic /channelml/channel_type/current_voltage_relation/gate[2]/time_course/@expr = 1/( (alpha + beta) * temp_adj_h ) < 0.5 ? (0.5 * temp_adj_h) : 1/(alpha + beta) /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@name = inf /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@from = h0 /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@to = h /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@expr_form = sigmoid /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@rate = 1 /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@scale = 4 /channelml/channel_type/current_voltage_relation/gate[2]/steady_state/@midpoint = -50 /channelml/channel_type/impl_prefs/table_settings/@max_v = 100 /channelml/channel_type/impl_prefs/table_settings/@min_v = -100 /channelml/channel_type/impl_prefs/table_settings/@table_divisions = 2000 // File from which this was generated: /home/Simon/NML2_Test/AOB_MC_neuroConstruct/cellMechanisms/NaxSH0_ChannelML/NaChannel.xml // XSL file with mapping to simulator: /home/Simon/NML2_Test/AOB_MC_neuroConstruct/cellMechanisms/NaxSH0_ChannelML/ChannelML_v1.8.1_NEURONmod.xsl ENDCOMMENT ? This is a NEURON mod file generated from a ChannelML file ? Unit system of original ChannelML file: Physiological Units COMMENT ChannelML file containing a single Channel description ENDCOMMENT TITLE Channel: NaxSH0_ChannelML COMMENT Na Channel ENDCOMMENT
  • Temperature: temp_adj_m = 2^((celsius - 24)/10)

Current Response Traces

Activation
Inactivation
Deactivation
Action Potential
Ramp

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